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2018 Vol.31, Issue 1 Preview Page

Research Article

28 February 2018. pp. 37-51
Abstract
References
1
Álvarez, I. and J.F. Wendel. 2003. Ribosomal ITS sequences and plant phylogenetic inference. Mol. Phylogenet. Evol. 29(3):417-434.
10.1016/S1055-7903(03)00208-2
2
Angiosperm phylogeny website. version 13. 2017. Araceae. Retrived Jul. 1, 2017, from http://www.mobot.org/mobot/research/apweb.
3
Bell, C.D. 2003. Preliminary phylogeny of Valerianaceae (Dipsacales) inferred from nuclear and chloroplast DNA sequence data. Mol. Phylogenet. Evol. 31(1):340-350.
10.1016/j.ympev.2003.07.00615019629
4
Boo, D. and S.J. Park. 2016. Molecular phylogenetic study of Korean Tilia L.. Korean J. Plant Res. 29(5):547-554 (in Korean).
10.7732/kjpr.2016.29.5.547
5
Bremer, B., K. Bremer, N. Heidari, P. Erixon, R.G. Olmestead, A.A. Anderberg, M. Källersjö and E. Barkhordarian. 2002. Phylogenetics of asterids based on 3 coding and 3 non-coding chloroplast DNA markers and the utility of non-coding DNA at higher taxonomic levels. Mol. Phylogenet. Evol. 24(2):274-301.
0.1016/S1055-7903(02)00240-3
6
CBOL Plant Working Group. 2009. A DNA barcode for land plants. PNASU. 106(31):12794-12797.
10.1073/pnas.090584510619666622PMC2722355
7
Chang, C.S., H. Kim and K.S. Chang. 2014. Provisional checklist of vascular plants for the Korea peninsula flora (KPF). Designpost, Paju. Korea. pp. 60-62.
8
Chen, S., H. Yao, J. Han, C. Liu, J. Song, L. Shi, Y. Zhu, X. Ma, T. Gao, X. Pang, K. Luo, Y. Li, X. Jia, Y. Lin and C. Leon. 2010. Validation of the ITS2 region as a novel DNA barcode for identifying medicinal plant species. PLoS ONE 5(1):e8613.
10.1371/journal.pone.000861320062805PMC2799520
9
China Plant BOL Group, D.Z. Li, L.M. Gao, H.T. Li, H. Wang, X.J. Ge, J.Q. Liu, Z.D. Chen, S.L. Zhou, S.L. Chen, J.B. Yang, C.X. Fu, C.X. Zeng, H.F. Yan, Y.J. Zhu, Y.S. Sun, S.Y. Chen, L. Zhao, K. Wang, T. Yang and G.W. Duan. 2011. Comparative analysis of a large dataset indicates that internal transcribed spacer (ITS) should be incorporated info the core barcode for seed plants. PNASU. 108(49):19641- 19646.
10
Farris, J.S., M. Kallersjo, A.G. Kluge and C. Bult. 1995. Testing significance of incongruence. Cladistics 10:315-319.
10.1111/j.1096-0031.1994.tb00181.x
11
Farris, J.S., V.A. Albert, M. Kallersjo, D. Lipscomb and A.G. Kluge. 1996. Parsimony jackknifing outperforms neighbor-joining. Cladistics 12:99-124.
10.1111/j.1096-0031.1996.tb00196.x
12
Felsenstein, J. 1985. Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39(4):783-791.
10.1111/j.1558-5646.1985.tb00420.x28561359
13
Gusman, G. and L. Gusman. 2002. The Genus Arisaema: A Monograph for Botanists and Nature Lovers. A.R.G. Gantner Verlag K.G., Ruggell, Liechenstein. pp. 1-438.
14
Han, J.W., S.G. Yang, H.J. Kim, C.G. Jang, J.M. Park and S.H. Kang. 2011. Phylogenetic study of Korean Chrysosplenium based on nrDNA ITS sequences. Korean J. Plant Res. 24(4):358-369 (in Korean).
10.7732/kjpr.2011.24.4.358
15
Hayashi, H., N. Hosono, M. Kondo, N. Hiraoka, Y. Ikeshiro, M. Shibano, G. Kusano, H. Yamamoto, T. Tanaka and K. Inoue. 2000. Phylogenetic relationship of six Glycyrrhiza species based on rbcL Sequences and chemical constituents. Biol. Pharm. Bull. 23(5):602-606.
10.1248/bpb.23.60210823673
16
Hong, J.K., J.C. Ynag, S.H. Oh, and Y.M. Lee. 2014. Molecular phylogenetic study of section Sabina (Genus Juniperus) in Korea based on chloroplast DNA matK and psbA-trnH sequences data. Korean J. Pl. Taxon. 44(1):51-58 (in Korean).
10.11110/kjpt.2014.44.1.51
17
Jung, Y.H., E.Y. Song, S.J. Chun, K.C. Jang, M. Kim, S.H. Kang and S.C. Kim. 2004. Phylogenetic analysis of plastid trnL-trnF sequencese from Arisaema species (Araceae) in Korea. Euphytica 138:81-88.
10.1023/B:EUPH.0000047078.20546.b6
18
Kato, H., K. Oginuma, Z. Gu, B. Hammel and H. Tobe. 1998. Phylogenetic relationships of Betulaceae based on matK sequences with particular reference to the positions of Ostryopsis. Acta Phytotax. Geobot. 49:89-97.
19
Kim, H.S., K.T. Park and S.J. Park. 2016. Molecular phylogenetic study of Korean Hydrangea L.. Korean J. Plant Res. 29(4):407-418 (in Korean).
10.7732/kjpr.2016.29.4.407
20
Kimura, M. 1980. A simple method for estimating evolutionary rates of base substitution through comparative studies of nucleotide sequence. J. Mol. Evol. 6:111-120.
10.1007/BF01731581
21
Ko, S.C. 2000. Monographs on Korean Vascular Plants I. Academy Publishing Co., Seoul, Korea. pp. 259-284 (in Korean).
22
Ko, S.C. 2007. Araceae. In The Genera of Vascular Plants of Korea. Flora of Editorial Committee (eds.), Academy Publishing Co., Seoul, Korea. pp. 1091-1093.
23
Ko, S.C. and Y.S. Kim. 1985. A taxonomic study on genus Arisaema in Korea. Korean J. Pl. Taxon. 15:67-109.
10.11110/kjpt.1985.15.2.067
24
Ko, S.C., S.L. O’Kane, Jr. and B.A. Schaal. 1993. Intraspecific taxonomy and comparisons of NrDNA ITS-2 sequences of Arisaema ringens (Araceae). Rhodora 95(883/884):254-260.
25
Ko, S.C., B.U. Oh, H.S. Lee and Y.S. Kim. 1990. A phylogenetic study of Arisaema by anatomical and palynological characres (I). -Anatomical characters. Korean J. Pl. Taxon. 20:9-35 (in Korean).
10.11110/kjpt.1990.20.1.009
26
Ko, S.C., D.B. Lee, Y.H. Shin and K.H. Tae. 2006. Arisaema thunbergii subsp. geomundoense S.C. Ko (Araceae), a new subspecies from Korea. Korean J. Pl. Taxon. 36:209-216.
10.11110/kjpt.2006.36.3.209
27
Ko, S.C., K.H. Tae, T.O. Kwon and Y.S. Kim. 1987. A cytotaxonomic study on some species of Arisaema. Korean J. Pl. Taxon. 17:189-205 (in Korean).
10.11110/kjpt.1987.17.4.189
28
Korea Institute of Oriental Medicine. 2017. Defining Dictionary for Medicinal Herbs. Retrived. Jul. 1, 2017, from http://boncho.kiom.re.kr/codex/ (in Korean).
29
Kumar S., Stecher G. and Tamura K. 2016. MEGA7: Molecular evolutionary genetics analysis version 7.0 for bigger datasets. Mol. Biol. Evol. 33:1870-1874.
10.1093/molbev/msw05427004904
30
Lee, J.S. and B.M. Kim. 2005. Analysis of genetic relationship among Arisaema Species using RAPD. Korean J. Hortic. Sci. Technol. 23:459-464 (in Korean).
31
Lee, T.B. 2003. Coluored Flora of Korea. Hyangmunsa, Seoul, Korea. pp. 640-643 (in Korean).
32
Lee, W.T. 1996. Coloured Standard Illustrations of Korean Plants. Academy Publishing Co., Seoul, Korea. p. 446 (in Korean).
33
Lee, Y.N. 2006. New Flora of Korea. Gyohaksa, Seoul, Korea. pp. 597-600 (in Korean).
34
Li, H., G. Zhu and J. Murata. 2010. Arisaema Martius. In Wu, Z.Y., P.H. Raven and D.Y. Hong (eds.), Flora of China, Vol. 23. Science Press, Beijing. China and Missouri Botanical Garden Press, St. Louis. USA. pp. 43-69.
35
Librado, P. and J. Rozas. 2009. DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25(1):1451-1452.
10.1093/bioinformatics/btp18719346325
36
Mansion, G., G. Rosenbaum, N. Schoenenberger, G. Bacchetta, J.A. Rossell and E. Conti. 2008. Phylogenetic analysis informed by geological history supports multiple, sequential invasions of the Mediterranean basin by the angiosperm family Araceae. Syst. Biol. 57:269-285.
10.1080/1063515080204402918425714
37
Murata, J. 1984. An attempt at in infrageneric classification of the genus Arisaema (Araceae). J. Fac. Sci. Univ. Tokyo. 12:281-336.
38
Murata, J. 1990. Introduction to the plants of Arisaema recently recognized from Japan. Aroideana 13(1-4):34-43.
39
Murata, J. 1991. The systematic position of Arisaema nepenthoides and A. wattii (Araceae). Kew Bulletin 46:119-128.
10.2307/4110750
40
Murata, J., S. Wu, K. Sasamura and T. Ohitoma. 2014. Comments on the taxonomic treatment of Arisaema (Araceae) in Flora of China. Acta Phytotax. Geobot. 65(3):161-176.
41
Nakai, T. 1950. Classes, Ordines, Familiae, Subfamiliae, Tribus, Genera nova quae attinent ad plantas Koreanas (Supplimentum). J. Jap. Bot. 25:5-7.
42
Nilssson, R.H. L. Tedersoo, K. Abarenkov, M. Ryberg, E. Kristiansson, M. Hartmann, C.L. Schoch, J.A.A. Nylander, J. Bergsten and T.M. Porter. 2012. Five simple guidelines for establishing basic authenticity and reliability of newly generated fungal ITS sequences. MycoKeys. 4:37-63.
10.3897/mycokeys.4.3606
43
Oh, B.U., S.C. Ko, W.P. Hong and Y.S. Kim. 1990. A phylogenetic consideration of Arisaema by anatomical and palynological characters II. - Palynological characters. Korean J. Pl. Taxon. 20:37-52 (In Korean).
10.11110/kjpt.1990.20.1.037
44
Park, S., H.J. Kim and S.J. Park. 2012. Molecular evolution of cpDNA trnL-F region in Korean Thalictrum L. (Ranunculaceae) and its phylogenetic relationships: Impacts of indel events. Korean J. Pl. Taxon. 42(1):13-23 (in Korean).
10.11110/kjpt.2012.42.1.013
45
Purushothaman, N., S.G. Newmaster, S. Ragupathy, N. Stalin, D. Suresh, D.R. Arunraj, G. Gnanasekaran, S.L. Vassou, D. Narasimhan and M. Parani. 2014. A tiered barcode authentication tool to differentiate medicinal Cassia species in India. Genet. Mol. Res. 13(2):2959-2968.
10.4238/2014.April.16.424782130
46
Renner, S.S., L.B. Zhang and J. Murata. 2004. A chloroplast phylogeny of Arisaema (Araceae) illutsrates Tertiary floristic links between Asia, North America, and East Africa. Am. J. Bot. 91(6):881-888.
10.3732/ajb.91.6.88121653444
47
Saitou, N. and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
3447015
48
Satake, Y. 1982. Wild Flowers of Japan I. Herbaceous Plants (including Dwarf Subshrubs). Heibonsha, Tokyo. Japan. pp. 303.
49
Stöver, B.C. and K.F. Müller. 2010. TreeGraph 2: combining and visualizing evidence from different phylogenetic analyses. BMC bioinformatics 11(1):7.
10.1186/1471-2105-11-720051126PMC2806359
50
Swofford, D.L. 2002. PAUP*: Phylogenetic Analysis Using Parsimony (*and Other Methods), Version 4.0. Sinauer Associates, Sunderland, Massachusetts (USA).
12504223
51
Techen, N., I. Parveen, Z. Pan and I.A. Khan. 2014. DNA barcoding of medicinal plant material for identification. Curr. Opin. Biotechnol. 25:103-110.
10.1016/j.copbio.2013.09.01024484887
52
White, T.J., T. Bruns, S. Lee and J.W. Taylor. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for Phylogenetics. In PCR Protocols: A Guide to Methods and applications. Innis, M.A., D.H. Gelfand, J. J. Sninsky and T. J. White. (eds.). Academic Press, Inc., New York, USA. pp. 315-322.
10.1016/B978-0-12-372180-8.50042-1
53
Yoo, K.P. and S.J. Park. 2012. A phylogenetic study of Korean Carpesium L. based on nrDNA ITS sequences. Korean J. Plant Res. 25(1):96-104 (in Korean).
10.7732/kjpr.2012.25.1.096
Information
  • Publisher :The Plant Resources Society of Korea
  • Publisher(Ko) :한국자원식물학회
  • Journal Title :Korean Journal of Plant Resources
  • Journal Title(Ko) :한국자원식물학회지
  • Volume : 31
  • No :1
  • Pages :37-51
  • Received Date : 2017-10-13
  • Revised Date : 2017-12-04
  • Accepted Date : 2018-01-19